Compilation error in Fedora-25: gfortran: error: unrecognized command line. - Forum - Delft3D

Hi Adri,

Thank you for your response. I am still struggling with the same issue. uuid-dev is already installed in the same directory "/usr/bin/", . Am I missing something? should I change any directory for uuid-dev anywhere?  Please help me out.

Kind regards,

Wasif 

Hi Adri,

Thanks for your qucik response. I checked the location of "libuuid.so.1" is located in "/lib64'. Before compiling, I applied your given command as "export LD_LIBRARY_PATH=/lib64:$LD_LIBRARY_PATH ".

In cofigure.log i found an error line as given below:

.......................

checking for MPI_Init... yes
checking for mpi.h... yes
checking for openmpif77... no
checking for mpif77... mpif77
checking for mpif.h... yes
checking for openmpif90... /home/Elahi/Downloads/libraries/mpich-3/bin/mpif90
checking for mpif.h... yes
gfortran: error: unrecognized command line option '-showme:link'; did you mean '--force-link'?   (any suggestion regarding this please?)
configure: creating ./config.lt
config.lt: creating libtool
checking for the extension of Delft3D plugins... .so
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating engines_gpl/d_hydro/Makefile
config.status: creating engines_gpl/d_hydro/packages/d_hydro/Makefile
.............. (lots of line without any error)

config.status: creating utils_lgpl/ods/packages/ods/src/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands

<<<end of configure.log>>>

In make.log error remains the same:

............

libtool: compile:  /home/Elahi/Downloads/libraries/mpich-3/bin/mpif90 -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -I-L/home/Elahi/Downloads/libraries/netcdf_4.4/lib -lnetcdff -DWITH_DELFTONLINE -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -I-L/home/Elahi/Downloads/libraries/netcdf_4.4/lib -lnetcdff -I/home/Elahi/Downloads/libraries/netcdf_4.4/include -O2 -ffree-line-length-none -cpp -c ec_module_version.F90  -fPIC -o .libs/ec_module_version.o
f951: Warning: Nonexistent include directory ‘-L/home/Elahi/Downloads/libraries/netcdf_4.4/lib’ [-Wmissing-include-dirs] ( it seems like generated from the error in configure?)))
f951: Warning: Nonexistent include directory ‘-L/home/Elahi/Downloads/libraries/netcdf_4.4/lib’ [-Wmissing-include-dirs]
libtool: compile:  /home/Elahi/Downloads/libraries/mpich-3/bin/mpif90 -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -I-L/home/Elahi/Downloads/libraries/netcdf_4.4/lib -lnetcdff -DWITH_DELFTONLINE -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -I-L/home/Elahi/Downloads/libraries/netcdf_4.4/lib -lnetcdff -I/home/Elahi/Downloads/libraries/netcdf_4.4/include -O2 -ffree-line-length-none -cpp -c ec_module_version.F90 -o ec_module_version.o >/dev/null 2>&1
........

..........

ibdata_f.a -lpthread -luuid -ldl -lrt -lexpat -lstdc++ -pthread -fopenmp -Wl,-rpath -Wl,/home/Elahi/delft3d_repository/src/lib -Wl,-rpath -Wl,/home/Elahi/Downloads/libraries/netcdf_4.4/lib -Wl,-rpath -Wl,/home/Elahi/Downloads/libraries/hdf5-1.8.13/lib
/usr/bin/ld: cannot find -luuid
collect2: error: ld returned 1 exit status
Makefile:631: recipe for target 'delwaq1' failed
make[6]: *** [delwaq1] Error 1
make[6]: Leaving directory '/home/Elahi/delft3d_repository/src/engines_gpl/waq/packages/delwaq1/src'
Makefile:755: recipe for target 'install' failed
make[5]: *** [install] Error 2
make[5]: Leaving directory '/home/Elahi/delft3d_repository/src/engines_gpl/waq/packages/delwaq1/src'
Makefile:488: recipe for target 'install-recursive' failed
make[4]: *** [install-recursive] Error 1
make[4]: Leaving directory '/home/Elahi/delft3d_repository/src/engines_gpl/waq/packages/delwaq1'
Makefile:496: recipe for target 'install-recursive' failed
make[3]: *** [install-recursive] Error 1
make[3]: Leaving directory '/home/Elahi/delft3d_repository/src/engines_gpl/waq/packages'
Makefile:488: recipe for target 'install-recursive' failed
make[2]: *** [install-recursive] Error 1
make[2]: Leaving directory '/home/Elahi/delft3d_repository/src/engines_gpl/waq'
Makefile:493: recipe for target 'install-recursive' failed
make[1]: *** [install-recursive] Error 1
make[1]: Leaving directory '/home/Elahi/delft3d_repository/src/engines_gpl'
Makefile:548: recipe for target 'install-recursive' failed
make: *** [install-recursive] Error 1
<<<end>>>>

uuid is used in src\engines_gpl\waq\packages\waq_utils_c\src\getuuid.c

If you can't get the compilation to find uuid, you can modifiy this file, so it will generate a fake uuid. Remove this section:

#ifdef WIN32
#include <windows.h>
#else
#include <uuid/uuid.h>
#endif

End replace the call to generate a uuid:

#ifdef WIN32
    CoCreateGuid( (GUID *)guid );
#else
    uuid_generate( guid );
#endif

with this:

    for (i = 0; i < 16; i++) {
        guid[i] = '0';
    }

Then remove -luuid in both these Makefile.am's

src\engines_gpl\waq\packages\delwaq2\src\Makefile.am

src\engines_gpl\waq\packages\delwaq1\src\Makefile.am

I hope this will avoid the need of the uuid library

Michelle

Hi Adri and Michelle,

Thanks a lot. I have successfully finished the compilation after removing WAQ. I tried by modifying getuuid.c as per Michelle's suggestion. Still, I got some errors related to uuid. However, I will use Delft3d to study wave, wind and sediment process altogether. Hope it could be done without WAQ, right? 

Thanks again. 

Kind regards,

Wasif