checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for icpc... no checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... gcc3 checking for icc... no checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for gcc option to accept ISO C99... none needed checking how to run the C preprocessor... gcc -E checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... 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(cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/9 -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/9/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking for Fortran flag to compile .f90 files... none checking for Fortran flag needed to accept free-form source... none checking for Fortran flag needed to accept unlimited column source lines... -ffree-line-length-none checking whether gfortran supports writing in form "binary" features... no checking whether gfortran supports shared specifier in open statement... no checking for Fortran flag needed to preprocess source... -cpp checking for ifort... no checking for gfortran... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/9 -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/9/../../.. -lgfortran -lm -lquadmath checking for Fortran flag needed to accept 132 column source lines... -ffixed-line-length-none checking whether gfortran supports shared specifier in open statement... no checking whether Fortran 77 compiler accepts -r8... no checking for NETCDF_FORTRAN... yes checking whether using Fortran preset flags... yes checking whether to disable double support... no checking for ANSI C header files... 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(cached) yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking malloc/malloc.h usability... no checking malloc/malloc.h presence... no checking for malloc/malloc.h... no checking sys/ipc.h usability... yes checking sys/ipc.h presence... yes checking for sys/ipc.h... yes checking sys/shm.h usability... yes checking sys/shm.h presence... yes checking for sys/shm.h... yes checking for main in -lstdc++... yes checking for struct shm_info... no checking expat.h usability... yes checking expat.h presence... yes checking for expat.h... yes checking for XML_Parse in -lexpat... yes checking for clock_gettime in -lrt... yes checking for vprintf... yes checking for _doprnt... no checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for an ANSI C-conforming const... yes checking for pid_t... yes checking for size_t... yes checking whether time.h and sys/time.h may both be included... yes checking for error_at_line... yes checking vfork.h usability... no checking vfork.h presence... no checking for vfork.h... no checking for fork... yes checking for vfork... yes checking for working fork... yes checking for working vfork... (cached) yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking whether sys/types.h defines makedev... no checking sys/mkdev.h usability... no checking sys/mkdev.h presence... no checking for sys/mkdev.h... no checking sys/sysmacros.h usability... yes checking sys/sysmacros.h presence... yes checking for sys/sysmacros.h... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking for vprintf... (cached) yes checking for _doprnt... (cached) no checking for gethostname... yes checking for gettimeofday... yes checking for memset... yes checking for strerror... yes checking for openmpic++... no checking for mpic++... mpic++ checking for MPI_Init... yes checking for mpi.h... yes checking for mpiifort... no checking for openmpif77... no checking for mpif77... mpif77 checking for mpif.h... yes checking for mpiifort... no checking for openmpif90... no checking for mpif90... mpif90 checking for mpif.h... yes configure: creating ./config.lt config.lt: creating libtool checking for the extension of Delft3D plugins... .so ./configure: line 20216: ACX_MKL: command not found checking if PETSc is wanted... no checking if Metis is wanted... no checking if BLAS is wanted... no checking if PROJ is wanted... no checking if Shapelib is wanted... no checking if GDAL is wanted... no checking for dlclose in -ldl... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating engines_gpl/d_hydro/Makefile config.status: creating engines_gpl/d_hydro/packages/d_hydro/Makefile config.status: creating engines_gpl/d_hydro/packages/d_hydro/src/Makefile config.status: creating engines_gpl/d_hydro/packages/Makefile config.status: creating engines_gpl/flow2d3d/default/Makefile config.status: creating engines_gpl/flow2d3d/Makefile config.status: creating engines_gpl/flow2d3d/packages/data/Makefile config.status: creating engines_gpl/flow2d3d/packages/data/src/allocation/Makefile config.status: creating engines_gpl/flow2d3d/packages/data/src/basics/Makefile config.status: creating engines_gpl/flow2d3d/packages/data/src/gdp/Makefile config.status: creating engines_gpl/flow2d3d/packages/data/src/general/Makefile config.status: creating engines_gpl/flow2d3d/packages/data/src/Makefile config.status: creating engines_gpl/flow2d3d/packages/data/src/parallel_mpi/Makefile config.status: creating 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tools_gpl/vs/packages/vs_version_number/src/Makefile config.status: creating tools_gpl/waq_run_processes/Makefile config.status: creating tools_gpl/waq_run_processes/packages/Makefile config.status: creating tools_gpl/waq_run_processes/packages/waq_run_processes/Makefile config.status: creating tools_gpl/waq_run_processes/packages/waq_run_processes/src/Makefile config.status: creating tools_gpl/waq_run_processes/packages/waq_run_processes_version_number/Makefile config.status: creating tools_gpl/waq_run_processes/packages/waq_run_processes_version_number/src/Makefile config.status: creating tools_gpl/waqpb/Makefile config.status: creating tools_gpl/waqpb/packages/Makefile config.status: creating tools_gpl/waqpb/packages/waqpb_export/Makefile config.status: creating tools_gpl/waqpb/packages/waqpb_export/src/Makefile config.status: creating tools_gpl/waqpb/packages/waqpb_import/Makefile config.status: creating tools_gpl/waqpb/packages/waqpb_import/src/Makefile config.status: creating tools_gpl/waqpb/packages/waqpb_lib/Makefile config.status: creating tools_gpl/waqpb/packages/waqpb_lib/src/Makefile config.status: creating utils_gpl/dhydrology/Makefile config.status: creating utils_gpl/dhydrology/packages/Makefile config.status: creating utils_gpl/dhydrology/packages/dhydrology_io/Makefile config.status: creating utils_gpl/dhydrology/packages/dhydrology_io/src/Makefile config.status: creating utils_gpl/dhydrology/packages/dhydrology_kernel/Makefile config.status: creating utils_gpl/dhydrology/packages/dhydrology_kernel/src/Makefile config.status: creating utils_gpl/flow1d/include/Makefile config.status: creating utils_gpl/flow1d/Makefile config.status: creating utils_gpl/flow1d/packages/flow1d_core/Makefile config.status: creating utils_gpl/flow1d/packages/flow1d_core/src/Makefile config.status: creating utils_gpl/flow1d/packages/flow1d_io/Makefile config.status: creating utils_gpl/flow1d/packages/flow1d_io/src/Makefile config.status: creating utils_gpl/flow1d/packages/flow1d/Makefile config.status: creating utils_gpl/flow1d/packages/flow1d/src/Makefile config.status: creating utils_gpl/flow1d/packages/Makefile config.status: creating utils_gpl/Makefile config.status: creating utils_gpl/morphology/include/Makefile config.status: creating utils_gpl/morphology/Makefile config.status: creating utils_gpl/morphology/packages/Makefile config.status: creating utils_gpl/morphology/packages/morphology_data/Makefile config.status: creating utils_gpl/morphology/packages/morphology_data/src/Makefile config.status: creating utils_gpl/morphology/packages/morphology_io/Makefile config.status: creating utils_gpl/morphology/packages/morphology_io/src/Makefile config.status: creating utils_gpl/morphology/packages/morphology_kernel/Makefile config.status: creating utils_gpl/morphology/packages/morphology_kernel/src/Makefile config.status: creating utils_gpl/morphology/packages/morphology_plugins_c/Makefile config.status: creating utils_gpl/morphology/packages/morphology_plugins_c/src/Makefile config.status: creating utils_gpl/morphology/packages/morphology_proclib/Makefile config.status: creating utils_gpl/morphology/packages/morphology_waq/Makefile config.status: creating utils_gpl/morphology/packages/morphology_waq/src/Makefile config.status: creating utils_gpl/trachytopes/Makefile config.status: creating utils_gpl/trachytopes/packages/Makefile config.status: creating utils_gpl/trachytopes/packages/trachytopes_io/Makefile config.status: creating utils_gpl/trachytopes/packages/trachytopes_io/src/Makefile config.status: creating utils_gpl/trachytopes/packages/trachytopes_kernel/Makefile config.status: creating utils_gpl/trachytopes/packages/trachytopes_kernel/src/Makefile config.status: creating utils_lgpl/delftio/include/Makefile config.status: creating utils_lgpl/delftio/Makefile config.status: creating utils_lgpl/delftio/packages/delftio/Makefile config.status: creating utils_lgpl/delftio/packages/delftio_shm/include/Makefile config.status: creating utils_lgpl/delftio/packages/delftio_shm/Makefile config.status: creating utils_lgpl/delftio/packages/delftio_shm/src/diof90/Makefile config.status: creating utils_lgpl/delftio/packages/delftio_shm/src/Makefile config.status: creating utils_lgpl/delftio/packages/delftio/src/delftio_sync/Makefile config.status: creating utils_lgpl/delftio/packages/delftio/src/diof90/Makefile config.status: creating utils_lgpl/delftio/packages/delftio/src/diof90Nefis/Makefile config.status: creating utils_lgpl/delftio/packages/delftio/src/Makefile config.status: creating utils_lgpl/delftio/packages/Makefile config.status: creating utils_lgpl/delftonline/include/Makefile config.status: creating utils_lgpl/delftonline/Makefile config.status: creating utils_lgpl/delftonline/src/delftonline/Makefile config.status: creating utils_lgpl/delftonline/src/dolcli/Makefile config.status: creating utils_lgpl/delftonline/src/dolprint/Makefile config.status: creating utils_lgpl/deltares_common/Makefile config.status: creating utils_lgpl/deltares_common/packages/deltares_common_c/include/Makefile config.status: creating utils_lgpl/deltares_common/packages/deltares_common_c/Makefile config.status: creating utils_lgpl/deltares_common/packages/deltares_common_c/src/Makefile config.status: creating utils_lgpl/deltares_common/packages/deltares_common/Makefile config.status: creating utils_lgpl/deltares_common/packages/deltares_common_mpi/Makefile config.status: creating utils_lgpl/deltares_common/packages/deltares_common_mpi/src/Makefile config.status: creating utils_lgpl/deltares_common/packages/deltares_common/src/Makefile config.status: creating utils_lgpl/deltares_common/packages/deltares_common/src/rd_token/Makefile config.status: creating utils_lgpl/deltares_common/packages/Makefile config.status: creating utils_lgpl/deltares_common/tests/02_streams_smalltest/Makefile config.status: creating utils_lgpl/deltares_common/tests/03_streams_test/Makefile config.status: creating utils_lgpl/deltares_common/tests/06_inifiles_test/Makefile config.status: creating utils_lgpl/deltares_common/tests/07_inifiles_treetest/Makefile config.status: creating utils_lgpl/deltares_common/tests/08_inifiles_dredgedumptest/Makefile config.status: creating utils_lgpl/deltares_common/tests/09_system_info/Makefile config.status: creating utils_lgpl/deltares_common/tests/Makefile config.status: creating utils_lgpl/d_hydro_lib/include/Makefile config.status: creating utils_lgpl/d_hydro_lib/Makefile config.status: creating utils_lgpl/d_hydro_lib/packages/d_hydro_lib/include/Makefile config.status: creating utils_lgpl/d_hydro_lib/packages/d_hydro_lib/Makefile config.status: creating utils_lgpl/d_hydro_lib/packages/d_hydro_lib/src/Makefile config.status: creating utils_lgpl/d_hydro_lib/packages/Makefile config.status: creating utils_lgpl/gridgeom/Makefile config.status: creating utils_lgpl/gridgeom/packages/gridgeom/Makefile config.status: creating utils_lgpl/gridgeom/packages/gridgeom/src/Makefile config.status: creating utils_lgpl/gridgeom/packages/Makefile config.status: creating utils_lgpl/ec_module/Makefile config.status: creating utils_lgpl/ec_module/packages/ec_module/Makefile config.status: creating utils_lgpl/ec_module/packages/ec_module/src/ectest/Makefile config.status: creating utils_lgpl/ec_module/packages/ec_module/src/Makefile config.status: creating utils_lgpl/ec_module/packages/ec_module/src/meteo/Makefile config.status: creating utils_lgpl/ec_module/packages/Makefile config.status: creating utils_lgpl/esmfsm/include/Makefile config.status: creating utils_lgpl/esmfsm/Makefile config.status: creating utils_lgpl/esmfsm/packages/esmfsm_c/include/Makefile config.status: creating utils_lgpl/esmfsm/packages/esmfsm_c/Makefile config.status: creating utils_lgpl/esmfsm/packages/esmfsm_c/src/esm/Makefile config.status: creating utils_lgpl/esmfsm/packages/esmfsm_c/src/fsm/Makefile config.status: creating utils_lgpl/esmfsm/packages/esmfsm_c/src/Makefile config.status: creating utils_lgpl/esmfsm/packages/esmfsm/Makefile config.status: creating utils_lgpl/esmfsm/packages/esmfsm/src/fsm/Makefile config.status: creating utils_lgpl/esmfsm/packages/esmfsm/src/Makefile config.status: creating utils_lgpl/esmfsm/packages/esmfsm_version_number/include/Makefile config.status: creating utils_lgpl/esmfsm/packages/esmfsm_version_number/Makefile config.status: creating utils_lgpl/esmfsm/packages/esmfsm_version_number/src/Makefile config.status: creating utils_lgpl/esmfsm/packages/Makefile config.status: creating utils_lgpl/esmfsm/tests/allocate_local/Makefile config.status: creating utils_lgpl/esmfsm/tests/esm_create/Makefile config.status: creating utils_lgpl/esmfsm/tests/esm_delete/Makefile config.status: creating utils_lgpl/esmfsm/tests/esm_info/Makefile config.status: creating utils_lgpl/esmfsm/tests/Makefile config.status: creating utils_lgpl/esmfsm/tests/test_01/Makefile config.status: creating utils_lgpl/esmfsm/tests/test_02/Makefile config.status: creating utils_lgpl/esmfsm/tests/test_03/Makefile config.status: creating utils_lgpl/esmfsm/tests/testesm/Makefile config.status: creating utils_lgpl/esmfsm/tests/testfill/Makefile config.status: creating utils_lgpl/esmfsm/tests/testfsm/Makefile config.status: creating utils_lgpl/ftnunit/Makefile config.status: creating utils_lgpl/ftnunit/packages/ftnunit/Makefile config.status: creating utils_lgpl/ftnunit/packages/ftnunit/src/Makefile config.status: creating utils_lgpl/ftnunit/packages/Makefile config.status: creating utils_lgpl/io_hyd/Makefile config.status: creating utils_lgpl/io_hyd/packages/io_hyd/Makefile config.status: creating utils_lgpl/io_hyd/packages/io_hyd/src/Makefile config.status: creating utils_lgpl/io_hyd/packages/Makefile config.status: creating utils_lgpl/io_netcdf/Makefile config.status: creating utils_lgpl/io_netcdf/packages/io_netcdf/Makefile config.status: creating utils_lgpl/io_netcdf/packages/io_netcdf/src/Makefile config.status: creating utils_lgpl/io_netcdf/packages/Makefile config.status: creating utils_lgpl/kdtree_wrapper/Makefile config.status: creating utils_lgpl/kdtree_wrapper/packages/kdtree_wrapper/Makefile config.status: creating utils_lgpl/kdtree_wrapper/packages/kdtree_wrapper/src/Makefile config.status: creating utils_lgpl/kdtree_wrapper/packages/Makefile config.status: creating utils_lgpl/Makefile config.status: creating utils_lgpl/metistools/Makefile config.status: creating utils_lgpl/metistools/packages/Makefile config.status: creating utils_lgpl/metistools/packages/metisoptions/Makefile config.status: creating utils_lgpl/metistools/packages/metisoptions/src/Makefile config.status: creating utils_lgpl/nefis/Makefile config.status: creating utils_lgpl/nefis/packages/Makefile config.status: creating utils_lgpl/nefis/packages/nefis/Makefile config.status: creating utils_lgpl/nefis/packages/nefis/src/Makefile config.status: creating utils_lgpl/nefis/packages/nefis/src_so/Makefile config.status: creating utils_lgpl/nefis/tests/demo_00/Makefile config.status: creating utils_lgpl/nefis/tests/demo_01/Makefile config.status: creating utils_lgpl/nefis/tests/demo_02/Makefile config.status: creating utils_lgpl/nefis/tests/Makefile config.status: creating utils_lgpl/nefis/tests/observations/Makefile config.status: creating utils_lgpl/nefis/tests/test_00/Makefile config.status: creating utils_lgpl/nefis/tests/test_01/Makefile config.status: creating utils_lgpl/nefis/tests/test_02/Makefile config.status: creating utils_lgpl/nefis/tests/test_03/Makefile config.status: creating utils_lgpl/nefis/tests/test_04/Makefile config.status: creating utils_lgpl/nefis/tests/test_05/Makefile config.status: creating utils_lgpl/nefis/tests/test_06/Makefile config.status: creating utils_lgpl/nefis/tests/test_07/Makefile config.status: creating utils_lgpl/nefis/tests/test_08/Makefile config.status: creating utils_lgpl/nefis/tests/test_09/Makefile config.status: creating utils_lgpl/nefis/tests/test_10/Makefile config.status: creating utils_lgpl/nefis/tests/test_11/Makefile config.status: creating utils_lgpl/nefis/tests/test_12/Makefile config.status: creating utils_lgpl/nefis/tests/test_13/Makefile config.status: creating utils_lgpl/nefis/tests/test_14/Makefile config.status: creating utils_lgpl/nefis/tests/test_15/Makefile config.status: creating utils_lgpl/nefis/tests/test_16/Makefile config.status: creating utils_lgpl/nefis/tests/test_17/Makefile config.status: creating utils_lgpl/nefis/tests/test_18/Makefile config.status: creating utils_lgpl/nefis/tests/test_19/Makefile config.status: creating utils_lgpl/nefis/tests/test_20/Makefile config.status: creating utils_lgpl/nefis/tests/test_21/Makefile config.status: creating utils_lgpl/ods/Makefile config.status: creating utils_lgpl/ods/packages/Makefile config.status: creating utils_lgpl/ods/packages/ods/Makefile config.status: creating utils_lgpl/ods/packages/ods/srcf/Makefile config.status: creating utils_lgpl/ods/packages/ods/src/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands === configuring in third_party_open/kdtree2 (/home/dflowfm/dflowfm_69918/src/third_party_open/kdtree2) configure: running /bin/bash ./configure --disable-option-checking '--prefix=/home/dflowfm/dflowfm_69918/src' 'CXXFLAGS=-O2 ' 'CFLAGS=-O2 ' 'FCFLAGS=-O2 ' 'FFLAGS=-O2 ' 'NETCDF_FORTRAN_CFLAGS=-I/usr/include' 'NETCDF_FORTRAN_LIBS=--L/usr/lib/x86_64-linux-gnu -lnetcdff -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lnetcdf -lnetcdf -ldl -lm' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '1000' is supported by ustar format... yes checking whether GID '1000' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for ifort... no checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether Fortran compiler accepts -warn all... no checking whether Fortran compiler accepts -static-libcxa... no checking whether Fortran compiler accepts -ip... no checking whether Fortran compiler accepts -fpe0... no checking whether Fortran compiler accepts -fno-alias... no checking whether Fortran compiler accepts -Wall... yes checking whether Fortran compiler accepts -fomit-framepointers... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src-f90/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands === configuring in third_party_open/libsigwatch (/home/dflowfm/dflowfm_69918/src/third_party_open/libsigwatch) configure: running /bin/bash ./configure --disable-option-checking '--prefix=/home/dflowfm/dflowfm_69918/src' 'CXXFLAGS=-O2 ' 'CFLAGS=-O2 ' 'FCFLAGS=-O2 ' 'FFLAGS=-O2 ' 'NETCDF_FORTRAN_CFLAGS=-I/usr/include' 'NETCDF_FORTRAN_LIBS=--L/usr/lib/x86_64-linux-gnu -lnetcdff -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lnetcdf -lnetcdf -ldl -lm' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... gcc3 checking for g77... no checking for xlf... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... yes checking if f77 supports -c -o file.o... yes checking if f77 supports -c -o file.o... (cached) yes checking whether the f77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking signal.h usability... yes checking signal.h presence... yes checking for signal.h... yes checking whether NSIG is defined... no checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib/gcc/x86_64-linux-gnu/9 -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/9/../../.. -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating sigwatch.html config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands