Hello. I am trying to help a student who needs this software to work
under centos 7. I know nothing about it.
First try using
./autogen.sh
./configure
make
libtool: compile: gfortran -DHAVE_CONFIG_H -I. -I../../../../..
-I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src
-I/include -DWITH_DELFTONLINE -g -O2 -ffree-line-length-none -cpp -c
netcdf_utils.F90 -fPIC -o .libs/netcdf_utils.o
Warning:
Nonexistent include directory "/include"
netcdf_utils.F90:33.4:
use netcdf
1
Fatal Error: Can't open module file
'netcdf.mod' for reading at (1): No such file or directory
make[6]: *** [netcdf_utils.lo] Error 1
...
I have installed via yum:
environment-modules-3.2.10-10.el7.x86_64
openmpi-1.10.7-1.el7.x86_64
openmpi-devel-1.10.7-1.el7.x86_64
mpich-3.0-3.0.4-10.el7.x86_64
hdf5-openmpi-1.8.12-10.el7.x86_64
netcdf-fortran-4.2-16.el7.x86_64
hdf5-mpich-1.8.12-10.el7.x86_64
netcdf-mpich-4.3.3.1-5.el7.x86_64
netcdf-openmpi-4.3.3.1-5.el7.x86_64
hdf5-openmpi-devel-1.8.12-10.el7.x86_64
netcdf-openmpi-devel-4.3.3.1-5.el7.x86_64
mpich-3.0-devel-3.0.4-10.el7.x86_64
hdf5-mpich-devel-1.8.12-10.el7.x86_64
netcdf-mpich-devel-4.3.3.1-5.el7.x86_64
netcdf-fortran-mpich-4.2-16.el7.x86_64
netcdf-fortran-openmpi-4.2-16.el7.x86_64
netcdf-fortran-openmpi-devel-4.2-16.el7.x86_64
netcdf-fortran-mpich-devel-4.2-16.el7.x86_64
netcdf-fortran-devel-4.2-16.el7.x86_64
openmpi3-3.0.0-1.el7.x86_64
openmpi3-devel-3.0.0-1.el7.x86_64
But none of it helped.
I tried downloading netcdf-4.6.1.tar.gz and built and installed it
locally and set
export PKG_CONFIG_PATH=/usr/local/lib/pkgconfig
and
export PKG_CONFIG_PATH=/usr/local/lib/pkgconfig/netcdf.pc
But nothing helps. It always gives same error.
second method attempt:
./build.sh -gnu
which sets bizarre things like
export MPIFC="/opt/mpich2-1.4.1-gcc-4.6.2/bin/mpif90"
(which does not exist)
20180807.200056 :: Running make ds-install &>
logs/make.log
20180807.200056 :: Make fails!
in logs/make.log
/opt/mpich2-1.4.1-gcc-4.6.2/bin/mpif90 -DWITH_DELFTONLINE -O2
-ffree-line-length-none -cpp -c -o version_number.o
version_number.f90
make[5]:
/opt/mpich2-1.4.1-gcc-4.6.2/bin/mpif90: Command not found
Starting to give up hope that it would even be possible to compile
this software on a centos 7 machine.
Does anyone know what she or I are doing wrong here? Has anyone
succeeded without buying expensive intel compiler and just using gnu
under centos 7 or RHEL 7?
Thank you very much.
